species:   Scscl
pid:       PID1688
parent:    Ssc-milR-164
paralog:   
locus:     NW_001820831.1:1733698-1733782
matures:   ['UUUGCAGUAUGAUUCGUUAUGG', 'GUAGCAUGAUUAUUACUGCAAAGU']
srr:       SRR12527895
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527895.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527895.cram NW_001820831.1:1733698-1733782

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

          **************************               ************************          
AAAUGACCGACUGUAGCAUGAUUAUUACUGCAAAGUCCGCAAGCUGGAGGUUUUUUGCAGUAUGAUUCGUUAUGGCCGAAUCCCU
.......((.(((((((..((((((.(((((((((.((.(......).))..))))))))))))))).))))))).)).......
-----------------------------------------------------UUUGCAGUAUGAUUCGUUAUGG---------- l=22 a=0 c
------------GUAGCAUGAUUAUUACUGCAAAGU------------------------------------------------- l=24 a=0 c*
-----------------------------------------------------UUUGCAGUAUGAUUCGUUAUGG---------- l=22 a=0 ma
------------GUAGCAUGAUUAUUACUGCAAAGU------------------------------------------------- l=24 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
